Panos  

 

PhD, Bioinformatics

Renal Fibrosis Lab
Institut de Médecine Moléculaire de Rangueil (I2MC)
INSERM

 
  
 

Home

Publications

CV

Software

Links

Contact


 
 
 

 
 
PUBLICATIONS

International Journals

  • Nielsen, R., Pedersen, T.A., Hagenbeek, D., Moulos, P., Siersbaek, R., Megens, E., Denissov, S., Borgesen, M., Francoijs, K.J., Mandrup, S., Stunnenberg, H.G.: Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis. Genes Dev 2008, 22(21):2953-2967. (PubMed)
  • Chatziioannou, A., Moulos, P., Kolisis, F.N.: Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB. BMC Bioinformatics 2009 10:354. (PubMed)
  • Moulos, P., Papadodima, O., Chatziioannou, A., Loutrari, H., Roussos, C., Kolisis, F.N.: A transcriptomic computational analysis of mastic oil-treated Lewis lung carcinomas reveals molecular mechanisms targeting tumor cell growth and survival. BMC Medical Genomics 2009, 2:68. (PubMed)
  • Chatziioannou, A., Moulos, P.: Exploiting statistical methodologies and controlled vocabularies for prioritized functional analysis of genomic experiments: The StRAnGER web application. Frontiers in Neuroscience 2011, 5:8. (PubMed)
  • Chatziioannou, A., Kanaris, I., Doukas, C., Moulos, P., Maglogiannis, I., Kolisis, F.N.: The GRISSOM Platform: Enabling distributed Processing and Management of Biological Data through fusion of Grid and Web Technologies. IEEE Transactions on Information Technology in Biomedicine 2010, 15(1):83-92. (PubMed)
  • McCalman, M.T., Rao, N.A.S., Moulos, P., Francoijs, K.J., Chatziioannou, A., Kolisis, F.N., Alexis, M.N., Stunnenberg, H.G., Mitsiou, D.J.: Coactivation of GR and NFKB alters the repertoire of their binding sites and target genes. Genome Res. 2011, 21(9), 1404-1416. (PubMed)
  • Klein, J., Jupp, S., Moulos, P., Fernandez, M., Buffin-Meyer, B., Chayaa, R., Charonis, A., Bascands, J.-L., Stevens, R., Schanstra, J.-P.: A novel web application to access multi-omics data on kidney disease. (under review in FASEB, 2011).

Conference Proceedings

  • Chatziioannou, A., Moulos, P.: ANDROMEDA: A MATLAB Automated cDNA Microarray Data Analysis Platform. AIAI 2007: 127-136, 19-21/9/2007, Athens, Greece. (Link)
  • Chatziioannou, A., Moulos, P.: Extending the Interpretation of Gene Profiling Microarray Experiments to Pathway Analysis Through the Use of Gene Ontology Terms. ICCS 2007: 55-61, 22-27/7/2007, Sheffield, England. (Link)
  • Chatziioanou, A., Maglogiannis, I., Kanaris, I., Doukas, C., Pilalis, E., Moulos, P., Kolisis, F.: GRISSOM: A Web based portal and repository for interpretation and storage of DNA microarray experiments, 4th EGEE User Forum/OGF 25 and OGF Europe's 2nd International Event, 2-6 March 2009, Catania, Italy.
  • Chatziioannou, A., Moulos, P., Pilalis, E., Kolisis, F.N., Maglogiannis, I., Doukas, C.: GRISSOM web based grid portal: Exploiting the power of grid infrastructure for the interpretation and storage of DNA microarray experiments, ITAB 2009: 1-5. (Link)
  • Moulos, P., Maglogiannis, I., Chatziioannou, A.: Applying gap statistic for automated unsupervised estimation of optimal number of clusters in microarray datasets. CIBB 2010. (Link)
  • Kokkotou, K., Zervou, M., Zoumpoulakis, P., Fotakis, C., Moulos, P., Tsantili-Kakoulidou, A., Liouni, M.: Metabolic monitoring of Greek white wines using HR NMR spectroscopy and multivariate statistical analysis. EAST-NMR Satellite Meeting 2010.
  • Kokkotou, K., Zervou, M., Zoumpoulakis, P., Fotakis, F., Moulos, P., Tsantili-Kakoulidou, A., Liouni, M. : NMR based metabolic monitoring of Greek white wines. WAC 2011

Conference Presentations (oral and poster)

  • Chatziioannou, A., Moulos, P.: ANDROMEDA: A MATLAB Automated cDNA Microarray Data Analysis Platform. AIAI 2007: 127-136 (Oral).
  • Moulos, P., Papadodima, O., Chatziioannou, A, Loutrari, H., Kolisis, F.N.: A transcriptomic computational analysis of mastic oil-treated Lewis lung carcinomas reveals molecular mechanisms targeting tumor cell growth and survival, in 60th Panhellenic Conference of Biochemistry and Molecular Biology, 2009, Athens, Greece (Oral).
  • Moulos, P., Chatziioannou, A., Kolisis, F.: ANDROMEDA : a platform for versatile 2-coloured microarray analysis platform implemented in MATLAB, in 4th Integrative Bioinformatics Workshop, Ghent, Belgium AND 2nd Conference of Hellenic Society of Computational Biology and Bioinformatics, Thessaloniki, Greece (Poster).
  • Papadodima, O., Moulos, P., Chatziioannou, A., Loutrari, H., Roussos, C., Kolisis, F: Time course microarray analysis of tumor gene expression associated with chemoprevention by mastic oil: prediction of putative target pathways, in 59th Panhellenic Conference of Biochemistry and Molecular Biology, 2007, Athens, Greece (Poster).
  • Moulos, P., Chatziioannou, A., Papadodima, O., Magkouta, S., Roussos, C., Loutrari, H., Kolisis, F.N.: Microarray analysis of lung adenocarcinoma gene expression in response to mastic oil:prediction putative target pathways, in Quantitative Molecular Biosciences Workshop, 2008, Spetses, Greece (Poster).
  • Mitsiou, D.J., McCalman, M.T., Moulos, P., Rao, A.S.N., Megens, E., Alexis, M.N., Kolisis, F.N., Stunnenberg, H.G.: Genome-wide profile of glucocorticoid receptor binding sites, in 8th EMBL Transcription Meeting, 2008, Heidelberg, Germany (Poster).
  • McCalman, M.T., Mitsiou, D.J., Rao, N.A.S., Moulos, P., Megens, E., Chatziioannou, A., Alexis, M.N., Kolisis, F.N., Stunnenberg, H.G.: Genome-wide location of glucocorticoid receptor binding sites, in CSHL Meeting on Nuclear Receptors: Bench to Bedside, Cold Spring Harbor Laboratory, 2008, Cold Spring Harbor, New York (Poster).
  • Moulos, P., Koryllou, A., Papadodima, O., Chatziioannou, A., Patrinou-Georgoula, M., Pletsa, V., Kolisis, F.N.: Bιοinformatic analysis of the cell death induced by n-methyl-n-nitrosourea, a model sn1 methylating agent, in two lung cancer cell lines of human origin,  in International Conference on Environmental Mutagens, 2009, Florence, Italy AND 60th Panhellenic Conference of Biochemistry and Molecular Biology, 2009, Athens, Greece (Poster).
  • Rao, A.S.N., McCalman, M.T., Moulos, P., Francoijs, K.J., Chatziioannou, A., Kolisis, F.N., Alexis, M.N., Mitsiou, D.J., Stunnenberg, H.G.: GR and NF-κB interaction on chromatin: global profiling and insights into their cross-talk. 9th EMBL Conference: Transcription and Chromatin, Heidelberg, Germany, 2010 (Poster).
  • Valavanis, I., Moulos, P., Maglogiannis, I., Klein, J., Schanstra, J.-P., Chatziioannou, A.: An artificial intelligence workflow for data mining human miRNAs and mouse mRNAs related to Obstructive Nephropathy. HSCBB 2011, Patras, Greece (Poster)

Book Chapters

  • Chatziioannou, A., Moulos, P.: DNA Microarrays: Analysis and Interpretation. In: Exarchos, T.P., Papadopoulos, A., Fotiadis, D.I.: Handbook of Research on Advanced Techniques in Diagnostic Imaging and Biomedical Applications, 2009. (Link)
  • Chatziioannou, A., Moulos, P.: Interpretation of Gene Expression Microarray Experiments. In: Maglogiannis, I., Karpouzis, K., Wallace, B.A., Soldatos, J.: Emerging Artificial Intelligence Applications in Computer Engineering, 2007. (Link)

Invited Talks

  • Moulos, P.: Feature Selection Stability Analysis for Classification Using Microarray Data, 11/10/2005, Institute of Molecular Biology and Biotechnology, Foundation for Research & Technology (FORTH), Heraclion, Greece. (Link)
 
 
 
 
© 2010 Panagiotis Moulos    
Home Publications CV Software Links Contact